Files
vigilcare-clinical/VigilCareClinicalAPI/Sepsis/SirsDetector.cs
T

161 lines
6.8 KiB
C#

using System.Text.Json;
using Microsoft.EntityFrameworkCore;
using StackExchange.Redis;
public class SirsDetector
{
// 30 minutes in seconds. This is a clinical parameter: SIRS criteria evaluated
// outside a 30-minute window are clinically stale. The TTL enforces the window
// automatically — no cleanup job required.
private const int SirsTtlSeconds = 1800;
private readonly IConnectionMultiplexer _redis;
private readonly IServiceProvider _services;
private readonly ILogger<SirsDetector> _logger;
public SirsDetector(
IConnectionMultiplexer redis,
IServiceProvider services,
ILogger<SirsDetector> logger)
{
_redis = redis;
_services = services;
_logger = logger;
}
public async Task<SirsResult> ProcessObservationAsync(
Guid encounterId,
Guid patientId,
string observationCode,
decimal value,
CancellationToken ct = default)
{
// Fast exit for non-SIRS codes. The sepsis engine subscribes to the full
// observation.recorded stream — the majority of messages (SpO2, potassium, glucose)
// are not SIRS-relevant and are discarded here without touching Redis or PostgreSQL.
if (!SirsEvaluator.SirsCodes.Contains(observationCode))
return SirsResult.NotSirsCode;
var cache = _redis.GetDatabase();
var key = SirsEvaluator.CriterionKey(encounterId, observationCode);
if (SirsEvaluator.MeetsCriterion(observationCode, value))
{
// SET with EX refreshes the TTL on every qualifying observation.
// A patient with tachycardia posting a reading every 60 seconds will keep
// sirs:{id}:HEART_RATE alive for 30 minutes after the LAST qualifying reading,
// not the first — the window slides forward with each new abnormal value.
await cache.StringSetAsync(key, "1", TimeSpan.FromSeconds(SirsTtlSeconds));
_logger.LogDebug("SIRS criterion set: {Key} (TTL={Ttl}s)", key, SirsTtlSeconds);
}
else
{
// Criterion no longer met — remove the key immediately rather than waiting
// for TTL expiry. If a patient's temperature normalises at 37.0 °C, the
// fever criterion must stop contributing to the count right away.
// Without this DEL, a recovered criterion could persist for up to 30 minutes
// and falsely sustain a SEPSIS_WARNING count.
await cache.KeyDeleteAsync(key);
_logger.LogDebug("SIRS criterion cleared: {Key}", key);
}
// Count active criteria in one MGET round-trip.
// MGET is O(N) where N = number of keys requested (4 here, always).
// Never use KEYS pattern for this check: KEYS scans the entire keyspace
// and blocks all other Redis operations until the scan completes.
var allKeys = SirsEvaluator.AllCriterionKeys(encounterId);
var values = await cache.StringGetAsync(allKeys);
var activeCount = values.Count(v => v.HasValue);
_logger.LogDebug(
"SIRS state for encounter {Id}: {Active}/4 criteria active after {Code}={Value}",
encounterId, activeCount, observationCode, value);
if (activeCount < 2)
return SirsResult.InsufficientCriteria(activeCount);
// Two or more criteria are active — attempt to create the alert.
var created = await TryCreateAlertAsync(encounterId, patientId, activeCount, ct);
return created ? SirsResult.AlertCreated : SirsResult.AlertAlreadyOpen;
}
// Creates the SEPSIS_WARNING alert and its outbox event in one atomic transaction.
// The INSERT WHERE NOT EXISTS pattern makes this safe under at-least-once delivery:
// if the consumer crashes after the INSERT but before committing the Kafka offset,
// the observation is reprocessed on restart. The second run hits the WHERE NOT EXISTS
// subquery, finds the existing open alert, inserts 0 rows, and returns false — no
// duplicate alert, no duplicate outbox event.
private async Task<bool> TryCreateAlertAsync(
Guid encounterId,
Guid patientId,
int activeCount,
CancellationToken ct)
{
using var scope = _services.CreateScope();
var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
await using var tx = await db.Database.BeginTransactionAsync(ct);
var alertId = Guid.NewGuid();
var triggeredAt = DateTimeOffset.UtcNow;
var details =
$"SIRS criteria met: {activeCount} of 4 criteria active within the 30-minute window.";
// One SQL round-trip: check + insert atomically.
// status IN ('OPEN', 'ESCALATED') prevents re-creating an alert that has been
// escalated but not yet resolved — the patient is still in danger.
var affected = await db.Database.ExecuteSqlInterpolatedAsync($"""
INSERT INTO clinical_alerts
(id, encounter_id, patient_id, alert_type, severity, details, status, triggered_at)
SELECT {alertId}, {encounterId}, {patientId},
'SEPSIS_WARNING', 'CRITICAL', {details}, 'OPEN', {triggeredAt}
WHERE NOT EXISTS (
SELECT 1 FROM clinical_alerts
WHERE encounter_id = {encounterId}
AND alert_type = 'SEPSIS_WARNING'
AND status IN ('OPEN', 'ESCALATED')
)
""", ct);
if (affected == 0)
{
await tx.RollbackAsync(ct);
_logger.LogDebug(
"SEPSIS_WARNING already open for encounter {Id} — no new alert", encounterId);
return false;
}
// Alert was created — write the outbox event in the same transaction.
// The relay (Phase 3) will publish to alert.generated, which Phase 6's
// notification worker reads to page the attending physician via RabbitMQ.
db.OutboxEvents.Add(new OutboxEvent
{
Id = Guid.NewGuid(),
Topic = "alert.generated",
Payload = JsonSerializer.Serialize(new
{
alertId,
encounterId,
patientId,
alertType = AlertType.SepsisWarning.ToDbString(),
severity = "Critical",
triggeredAt,
partitionKey = encounterId.ToString()
}),
PartitionKey = encounterId.ToString(),
CreatedAt = DateTimeOffset.UtcNow
});
await db.SaveChangesAsync(ct);
await tx.CommitAsync(ct);
_logger.LogWarning(
"SEPSIS_WARNING alert {AlertId} created for encounter {EncounterId} " +
"— {Active}/4 SIRS criteria active",
alertId, encounterId, activeCount);
return true;
}
}