214 lines
9.3 KiB
C#
214 lines
9.3 KiB
C#
using FluentAssertions;
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using Microsoft.EntityFrameworkCore;
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using Microsoft.Extensions.DependencyInjection;
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using StackExchange.Redis;
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[Collection("Integration")]
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public class SirsDetectorTests : IAsyncLifetime
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{
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private readonly ApiFixture _fixture;
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private Guid _encounterId;
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private Guid _patientId;
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public SirsDetectorTests(ApiFixture fixture) => _fixture = fixture;
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public async Task InitializeAsync()
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{
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// Reset PostgreSQL test data
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using var scope = _fixture.Services.CreateScope();
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var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
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await DbResetHelper.ResetAsync(db);
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var patient = new Patient
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{
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Id = Guid.NewGuid(), Mrn = "MRN-SIRS-001", FirstName = "SIRS", LastName = "Test",
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DateOfBirth = new DateOnly(1960, 1, 1), Gender = "M",
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CreatedAt = DateTimeOffset.UtcNow
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};
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var encounter = new Encounter
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{
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Id = Guid.NewGuid(), PatientId = patient.Id, EncounterType = EncounterType.Inpatient,
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Status = EncounterStatus.Active, Department = Department.Icu,
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AttendingPhysician = "Dr. SIRS", AdmittedAt = DateTimeOffset.UtcNow,
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CreatedAt = DateTimeOffset.UtcNow
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};
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db.Patients.Add(patient);
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db.Encounters.Add(encounter);
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await db.SaveChangesAsync();
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_patientId = patient.Id;
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_encounterId = encounter.Id;
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// Flush all SIRS keys for this encounter from Redis
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var redis = scope.ServiceProvider.GetRequiredService<IConnectionMultiplexer>();
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var cache = redis.GetDatabase();
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foreach (var key in SirsEvaluator.AllCriterionKeys(_encounterId))
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await cache.KeyDeleteAsync(key);
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}
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public Task DisposeAsync() => Task.CompletedTask;
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private SirsDetector CreateDetector()
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{
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using var scope = _fixture.Services.CreateScope();
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return scope.ServiceProvider.GetRequiredService<SirsDetector>();
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}
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// Test 1: one criterion met — insufficient for alert
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[Fact]
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public async Task OneCriterion_NoAlert()
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{
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using var scope = _fixture.Services.CreateScope();
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var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
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var result = await detector.ProcessObservationAsync(
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_encounterId, _patientId, "HEART_RATE", 95m);
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result.Outcome.Should().Be(SirsOutcome.InsufficientCriteria);
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result.ActiveCount.Should().Be(1);
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// Verify Redis key was set
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var redis = scope.ServiceProvider.GetRequiredService<IConnectionMultiplexer>();
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var ttl = await redis.GetDatabase()
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.KeyTimeToLiveAsync(SirsEvaluator.CriterionKey(_encounterId, "HEART_RATE"));
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ttl.Should().NotBeNull().And.BeGreaterThan(TimeSpan.Zero);
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}
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// Test 2: two criteria met — SEPSIS_WARNING alert created
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[Fact]
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public async Task TwoCriteriaMet_AlertCreated()
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{
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using var scope = _fixture.Services.CreateScope();
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var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
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var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
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// Tachycardia
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var r1 = await detector.ProcessObservationAsync(
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_encounterId, _patientId, "HEART_RATE", 95m);
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r1.Outcome.Should().Be(SirsOutcome.InsufficientCriteria);
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// Fever — now count = 2 → alert
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var r2 = await detector.ProcessObservationAsync(
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_encounterId, _patientId, "TEMP_C", 38.5m);
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r2.Outcome.Should().Be(SirsOutcome.AlertCreated);
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// Verify clinical_alert row in PostgreSQL
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var alert = await db.ClinicalAlerts.SingleAsync();
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alert.AlertType.Should().Be(AlertType.SepsisWarning);
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alert.Severity.Should().Be(AlertSeverity.Critical);
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alert.Status.Should().Be(AlertStatus.Open);
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alert.EncounterId.Should().Be(_encounterId);
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alert.PatientId.Should().Be(_patientId);
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// Verify outbox event was written in the same transaction
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var outbox = await db.OutboxEvents.SingleAsync();
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outbox.Topic.Should().Be("alert.generated");
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outbox.PartitionKey.Should().Be(_encounterId.ToString());
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}
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// Test 3: third criterion met while alert already open — no second alert
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[Fact]
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public async Task ThreeCriteriaMet_NoSecondAlert()
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{
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using var scope = _fixture.Services.CreateScope();
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var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
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var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
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await detector.ProcessObservationAsync(_encounterId, _patientId, "HEART_RATE", 95m);
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await detector.ProcessObservationAsync(_encounterId, _patientId, "TEMP_C", 38.5m);
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// Third criterion (tachypnea) — alert already open
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var r3 = await detector.ProcessObservationAsync(
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_encounterId, _patientId, "RESP_RATE", 22m);
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r3.Outcome.Should().Be(SirsOutcome.AlertAlreadyOpen);
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// Still exactly one alert — the WHERE NOT EXISTS prevented a duplicate
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var alertCount = await db.ClinicalAlerts.CountAsync();
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alertCount.Should().Be(1, "a second SEPSIS_WARNING must not be created while one is already open");
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}
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// Test 4: criterion clears — Redis key deleted, alert remains open
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//
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// This is the most important test in Phase 5. It verifies:
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// (a) The DEL path works when a criterion is no longer met.
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// (b) Clearing a criterion does not resolve the existing alert — the clinical
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// workflow requires explicit acknowledgment. A patient whose temperature
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// normalises may still be septic; the alert is for the clinician to evaluate.
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[Fact]
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public async Task CriterionClears_KeyDeleted_AlertRemainsOpen()
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{
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using var scope = _fixture.Services.CreateScope();
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var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
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var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
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var redis = scope.ServiceProvider.GetRequiredService<IConnectionMultiplexer>();
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var cache = redis.GetDatabase();
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// Establish two criteria and create the alert
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await detector.ProcessObservationAsync(_encounterId, _patientId, "HEART_RATE", 95m);
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await detector.ProcessObservationAsync(_encounterId, _patientId, "TEMP_C", 38.5m);
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// Temperature normalises
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var result = await detector.ProcessObservationAsync(
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_encounterId, _patientId, "TEMP_C", 37.0m);
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// TEMP_C key must be gone from Redis
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var tempKeyExists = await cache.KeyExistsAsync(
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SirsEvaluator.CriterionKey(_encounterId, "TEMP_C"));
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tempKeyExists.Should().BeFalse("a cleared criterion must be deleted from Redis immediately");
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// HEART_RATE key must still exist (criterion still met)
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var hrKeyExists = await cache.KeyExistsAsync(
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SirsEvaluator.CriterionKey(_encounterId, "HEART_RATE"));
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hrKeyExists.Should().BeTrue("an active criterion must remain until its own TTL or a clearing observation");
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// Active count is now 1, but alert must stay open
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result.Outcome.Should().Be(SirsOutcome.InsufficientCriteria);
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result.ActiveCount.Should().Be(1);
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var alert = await db.ClinicalAlerts.SingleAsync();
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alert.Status.Should().Be(AlertStatus.Open,
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"the existing alert is not auto-resolved when criteria drop below 2 — " +
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"clinical acknowledgment is required");
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}
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// Test 5: at-least-once redelivery — idempotency under simulated crash
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[Fact]
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public async Task DuplicateObservationEvent_AlertCreatedOnce()
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{
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using var scope = _fixture.Services.CreateScope();
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var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
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var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
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await detector.ProcessObservationAsync(_encounterId, _patientId, "HEART_RATE", 95m);
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// Simulate: the consumer crashes after this call completes but before committing
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// the Kafka offset. On restart, the same observation is redelivered.
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await detector.ProcessObservationAsync(_encounterId, _patientId, "TEMP_C", 38.5m);
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await detector.ProcessObservationAsync(_encounterId, _patientId, "TEMP_C", 38.5m); // duplicate
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var alertCount = await db.ClinicalAlerts.CountAsync();
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alertCount.Should().Be(1, "WHERE NOT EXISTS prevents duplicate alert on redelivery");
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var outboxCount = await db.OutboxEvents.CountAsync();
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outboxCount.Should().Be(1, "outbox event must be written exactly once");
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}
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// Test 6: non-SIRS code — engine ignores it entirely
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[Fact]
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public async Task NonSirsCode_NoRedisInteraction()
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{
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using var scope = _fixture.Services.CreateScope();
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var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
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var redis = scope.ServiceProvider.GetRequiredService<IConnectionMultiplexer>();
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var result = await detector.ProcessObservationAsync(
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_encounterId, _patientId, "POTASSIUM_MEQ_L", 3.2m);
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result.Outcome.Should().Be(SirsOutcome.NotSirsCode);
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// No SIRS keys were created for this encounter
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var anyKey = await redis.GetDatabase()
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.KeyExistsAsync(SirsEvaluator.CriterionKey(_encounterId, "POTASSIUM_MEQ_L"));
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anyKey.Should().BeFalse();
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}
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} |