Files
vigilcare-clinical/VigilCareClinicalAPI.Tests/SirsDetectorTests.cs
T

214 lines
9.3 KiB
C#

using FluentAssertions;
using Microsoft.EntityFrameworkCore;
using Microsoft.Extensions.DependencyInjection;
using StackExchange.Redis;
[Collection("Integration")]
public class SirsDetectorTests : IAsyncLifetime
{
private readonly ApiFixture _fixture;
private Guid _encounterId;
private Guid _patientId;
public SirsDetectorTests(ApiFixture fixture) => _fixture = fixture;
public async Task InitializeAsync()
{
// Reset PostgreSQL test data
using var scope = _fixture.Services.CreateScope();
var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
await DbResetHelper.ResetAsync(db);
var patient = new Patient
{
Id = Guid.NewGuid(), Mrn = "MRN-SIRS-001", FirstName = "SIRS", LastName = "Test",
DateOfBirth = new DateOnly(1960, 1, 1), Gender = "M",
CreatedAt = DateTimeOffset.UtcNow
};
var encounter = new Encounter
{
Id = Guid.NewGuid(), PatientId = patient.Id, EncounterType = EncounterType.Inpatient,
Status = EncounterStatus.Active, Department = Department.Icu,
AttendingPhysician = "Dr. SIRS", AdmittedAt = DateTimeOffset.UtcNow,
CreatedAt = DateTimeOffset.UtcNow
};
db.Patients.Add(patient);
db.Encounters.Add(encounter);
await db.SaveChangesAsync();
_patientId = patient.Id;
_encounterId = encounter.Id;
// Flush all SIRS keys for this encounter from Redis
var redis = scope.ServiceProvider.GetRequiredService<IConnectionMultiplexer>();
var cache = redis.GetDatabase();
foreach (var key in SirsEvaluator.AllCriterionKeys(_encounterId))
await cache.KeyDeleteAsync(key);
}
public Task DisposeAsync() => Task.CompletedTask;
private SirsDetector CreateDetector()
{
using var scope = _fixture.Services.CreateScope();
return scope.ServiceProvider.GetRequiredService<SirsDetector>();
}
// Test 1: one criterion met — insufficient for alert
[Fact]
public async Task OneCriterion_NoAlert()
{
using var scope = _fixture.Services.CreateScope();
var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
var result = await detector.ProcessObservationAsync(
_encounterId, _patientId, "HEART_RATE", 95m);
result.Outcome.Should().Be(SirsOutcome.InsufficientCriteria);
result.ActiveCount.Should().Be(1);
// Verify Redis key was set
var redis = scope.ServiceProvider.GetRequiredService<IConnectionMultiplexer>();
var ttl = await redis.GetDatabase()
.KeyTimeToLiveAsync(SirsEvaluator.CriterionKey(_encounterId, "HEART_RATE"));
ttl.Should().NotBeNull().And.BeGreaterThan(TimeSpan.Zero);
}
// Test 2: two criteria met — SEPSIS_WARNING alert created
[Fact]
public async Task TwoCriteriaMet_AlertCreated()
{
using var scope = _fixture.Services.CreateScope();
var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
// Tachycardia
var r1 = await detector.ProcessObservationAsync(
_encounterId, _patientId, "HEART_RATE", 95m);
r1.Outcome.Should().Be(SirsOutcome.InsufficientCriteria);
// Fever — now count = 2 → alert
var r2 = await detector.ProcessObservationAsync(
_encounterId, _patientId, "TEMP_C", 38.5m);
r2.Outcome.Should().Be(SirsOutcome.AlertCreated);
// Verify clinical_alert row in PostgreSQL
var alert = await db.ClinicalAlerts.SingleAsync();
alert.AlertType.Should().Be(AlertType.SepsisWarning);
alert.Severity.Should().Be(AlertSeverity.Critical);
alert.Status.Should().Be(AlertStatus.Open);
alert.EncounterId.Should().Be(_encounterId);
alert.PatientId.Should().Be(_patientId);
// Verify outbox event was written in the same transaction
var outbox = await db.OutboxEvents.SingleAsync();
outbox.Topic.Should().Be("alert.generated");
outbox.PartitionKey.Should().Be(_encounterId.ToString());
}
// Test 3: third criterion met while alert already open — no second alert
[Fact]
public async Task ThreeCriteriaMet_NoSecondAlert()
{
using var scope = _fixture.Services.CreateScope();
var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
await detector.ProcessObservationAsync(_encounterId, _patientId, "HEART_RATE", 95m);
await detector.ProcessObservationAsync(_encounterId, _patientId, "TEMP_C", 38.5m);
// Third criterion (tachypnea) — alert already open
var r3 = await detector.ProcessObservationAsync(
_encounterId, _patientId, "RESP_RATE", 22m);
r3.Outcome.Should().Be(SirsOutcome.AlertAlreadyOpen);
// Still exactly one alert — the WHERE NOT EXISTS prevented a duplicate
var alertCount = await db.ClinicalAlerts.CountAsync();
alertCount.Should().Be(1, "a second SEPSIS_WARNING must not be created while one is already open");
}
// Test 4: criterion clears — Redis key deleted, alert remains open
//
// This is the most important test in Phase 5. It verifies:
// (a) The DEL path works when a criterion is no longer met.
// (b) Clearing a criterion does not resolve the existing alert — the clinical
// workflow requires explicit acknowledgment. A patient whose temperature
// normalises may still be septic; the alert is for the clinician to evaluate.
[Fact]
public async Task CriterionClears_KeyDeleted_AlertRemainsOpen()
{
using var scope = _fixture.Services.CreateScope();
var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
var redis = scope.ServiceProvider.GetRequiredService<IConnectionMultiplexer>();
var cache = redis.GetDatabase();
// Establish two criteria and create the alert
await detector.ProcessObservationAsync(_encounterId, _patientId, "HEART_RATE", 95m);
await detector.ProcessObservationAsync(_encounterId, _patientId, "TEMP_C", 38.5m);
// Temperature normalises
var result = await detector.ProcessObservationAsync(
_encounterId, _patientId, "TEMP_C", 37.0m);
// TEMP_C key must be gone from Redis
var tempKeyExists = await cache.KeyExistsAsync(
SirsEvaluator.CriterionKey(_encounterId, "TEMP_C"));
tempKeyExists.Should().BeFalse("a cleared criterion must be deleted from Redis immediately");
// HEART_RATE key must still exist (criterion still met)
var hrKeyExists = await cache.KeyExistsAsync(
SirsEvaluator.CriterionKey(_encounterId, "HEART_RATE"));
hrKeyExists.Should().BeTrue("an active criterion must remain until its own TTL or a clearing observation");
// Active count is now 1, but alert must stay open
result.Outcome.Should().Be(SirsOutcome.InsufficientCriteria);
result.ActiveCount.Should().Be(1);
var alert = await db.ClinicalAlerts.SingleAsync();
alert.Status.Should().Be(AlertStatus.Open,
"the existing alert is not auto-resolved when criteria drop below 2 — " +
"clinical acknowledgment is required");
}
// Test 5: at-least-once redelivery — idempotency under simulated crash
[Fact]
public async Task DuplicateObservationEvent_AlertCreatedOnce()
{
using var scope = _fixture.Services.CreateScope();
var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
var db = scope.ServiceProvider.GetRequiredService<AppDbContext>();
await detector.ProcessObservationAsync(_encounterId, _patientId, "HEART_RATE", 95m);
// Simulate: the consumer crashes after this call completes but before committing
// the Kafka offset. On restart, the same observation is redelivered.
await detector.ProcessObservationAsync(_encounterId, _patientId, "TEMP_C", 38.5m);
await detector.ProcessObservationAsync(_encounterId, _patientId, "TEMP_C", 38.5m); // duplicate
var alertCount = await db.ClinicalAlerts.CountAsync();
alertCount.Should().Be(1, "WHERE NOT EXISTS prevents duplicate alert on redelivery");
var outboxCount = await db.OutboxEvents.CountAsync();
outboxCount.Should().Be(1, "outbox event must be written exactly once");
}
// Test 6: non-SIRS code — engine ignores it entirely
[Fact]
public async Task NonSirsCode_NoRedisInteraction()
{
using var scope = _fixture.Services.CreateScope();
var detector = scope.ServiceProvider.GetRequiredService<SirsDetector>();
var redis = scope.ServiceProvider.GetRequiredService<IConnectionMultiplexer>();
var result = await detector.ProcessObservationAsync(
_encounterId, _patientId, "POTASSIUM_MEQ_L", 3.2m);
result.Outcome.Should().Be(SirsOutcome.NotSirsCode);
// No SIRS keys were created for this encounter
var anyKey = await redis.GetDatabase()
.KeyExistsAsync(SirsEvaluator.CriterionKey(_encounterId, "POTASSIUM_MEQ_L"));
anyKey.Should().BeFalse();
}
}